- 2000-01, Postdoctoral fellow, University of
- 1999, Ph. D., The Pennsylvania State University,
- 1994, B.S. cum laude, Temple
- Plant genomics
- Bioinformatics and computational biology
- Plant stress physiology
Our lab uses modern genomic and transcriptomic approaches to answer fundamental
questions in plant biology. Currently, we are researching the transcriptional
changes that underlie seasonal dormancy transitions in trees and investigating
the role and evolution of MADS-box genes in peach. We collaborate with outside
labs on a variety of computational projects in species as varied as nematodes,
cotton, turfgrass and velvetbean.
- International Peach Genome Consortium. 2013. Genome sequencing and analysis of peach [Prunus persica (L.) Batsch], a model genome for fruit crops and forest trees.Nature Genetics 45: 487–494.
- The International Peach Genome Initiative. 2013. The draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution. Nature Genetics. In press. doi:10.1038/ng.2586
- Fu Z.,Agudelo P and Wells CE. 2012.
Induction of glutaredoxin expression in response to desiccation stress in the
foliar nematode Aphelenchoides fragariae. Journal of Nematology 44(4): 378-384.
- Fu Z., Wells CE and Agudelo P. 2012. Differential expression of a beta-1,4-endoglucanase induced by diet change in the foliar nematode Aphelenchoides fragariae. Phytopathology 102: 804-811.
- Fite K, Smiley ET, McIntyre J, and Wells CE. 2011. Evaluation of a soil decompaction and amendment process for urban trees. Arboriculture and Urban Forestry 37:
- Baldi E, Wells CE, Marangoni B. 2010. Nitrogen absorption and respiration in white and brown peach roots. Journal of Plant Nutrition 33: 461-469.
- Zeng G, Birchfield ST and Wells CE. 2010.
Rapid automated detection of roots in minirhizotron images. Machine Vision and Applications 21:309-317.
- Wiseman PE and Wells CE. 2009. Arbuscular mycorrhizal inoculation alters fine root demography in landscape trees. Journal of Environmental Horticulture 27(2): 70-79.
- Wiseman PE,Colvin KH and Wells CE. 2009. Performance of mycorrhizal products marketed for woody landscape plants. Journal of Environmental Horticulture 27(1): 41-50.
- Baldwin CM,Liu H, McCarty LB, Luo H, Wells CE and JE Toler. 2009. Altered light spectral qualities impact on warm season turfgrass growth and development. Crop
- Zeng G, Birchfield ST and Wells CE. 2008. Automatic discrimination of fine roots in minirhizotron images. New Phytologist 177: 549-557.
- HORT 8140: Environmental Plant Stress Physiology
- FOR 2210: Forest Biology
- BIOL 8710: Bioinformatics Journal Club
- BIOL 4910H Honors research
- BIOL 4010/6010 Plant Physiology, Bioinformatics module
- BIOL 3040 Biology of Plants
Current Graduate Students
- Nathan Redding (Molecular basis of reniform nematode/soybean root interaction)
- Elspeth Murday (Velvetbean transcriptome)
- Wei Li (Molecular basis of reniform nematode/cotton root interaction)
- International Society of Computational Biologists