Troy Farmer

Assistant Professor of Fisheries Ecology
Forestry and Environmental Conservation Department

Office: 262 Lehotsky Hall
Phone: 864-656-2932
Email: tmfarme@clemson.edu
Personal Website: http://www.farmerlabclemson.com

 

 Educational Background

Ph.D. Evolution, Ecology & Organismal Biology
The Ohio State University 2013

M.S. Fisheries, Aquaculture & Aquatic Science
Auburn University 2008

B.S. Fisheries, Aquaculture & Aquatic Science
Auburn University 2004

 Courses Taught

Fishery Management & Conservation (WFB 4180/6180)
Fisheries Techniques (WFB 4160/6160)
Quantitative Techniques in Fisheries Science (WFB 8610)
Black Bass Reservoir Ecology Creative Inquiry (FNR 4700)
Estuarine Fish Ecology Creative Inquiry (FNR 4700)

 Research Interests

My research interests intersect the basic and applied fields of aquatic ecology and fisheries management. I am particularly interested in conducting research that combines empirical approaches (lab or field) with quantitative and modeling approaches to investigate processes regulating fish populations and communities. An overarching goal of my research is to generate novel ecological knowledge that can inform applied management needs. Along these lines, much of my research has focused on understanding how ecological stressors (i.e., climate change, hypoxia [aka “dead zones”], salinity exposure) affect fish populations, and subsequently, impact management of aquatic resources.

 Publications

Cannaday, J.D. and T.M. Farmer. In press. Assessing the effects of sub-tropical winter thermal conditions on coolwater fish reproduction. Ecology of Freshwater Fish.

Bunch, A., H. Hershey, G. Reger, F. Hoogakker, B. Donovan, and T.M. Farmer. 2021. A Bayesian multistate approach to evaluate movements of an invasive freshwater estuarine-opportunist. Canadian Journal of Fisheries and Aquatic Sciences. Just-In https://doi.org/10.1139/cjfas-2020-0378

Erickson, K., J. West, M. Dance, T.M. Farmer, J. Ballenger, and S. Midway. 2021. Changing climate associated with the range-wide decline of an estuarine finfish. Global Change Biology 27: 2520-2536.

Marcek, B., T.M. Farmer, E. Marschall, G. Petris, and S. Ludsin. 2021. Ecosystem change as a driver of fish recruitment dynamics: A case study of two Lake Erie Yellow Perch populations. Freshwater Biology 66: 1149-1168.

Staton, B. A., M.J. Catalano, T.M. Farmer, A. Abebe, & F.S. Dobson. 2017. Development and evaluation of a migration timing forecast model for Kuskokwim River Chinook salmon. Fisheries Research 194: 9-21.

Hellmann, J.K., I.Y. Ligocki, C.M. O’Connor, A.R. Reddon, T.M. Farmer, S.E. Marsh-Rollo, S. Balshine, and I.M. Hamilton. 2016. The influence of status and the social environment on energy stores in a social fish. Journal of Fish Biology. doi:10.1111/jfb.12890.

Farmer, T.M., E.A. Marschall, K. Dabrowski and S.A. Ludsin. 2015. Short winters threaten temperate fish populations. Nature Communications 6:7724 doi: 10.1038/ncomms8724

R. Kraus, C. Knight, T.M. Farmer, A.M. Gorman, G. Warren, P. Collingsworth, P. Kocovsky, J. Conroy. 2015. Dynamic hypoxic zones in Lake Erie compress fish habitat, altering vulnerability to fishing gears. Canadian Journal of Fisheries and Aquatic Sciences 72: 1-10.

Hellmann, J.K., C.M. O’Connor, I.Y. Ligocki, T.M. Farmer, T.J. Arnold, A.R. Reddon, K.A. Garvy, S.E. Marsh-Rollo, S. Balshine and I.M. Hamilton. 2015. Evidence for alternative male morphs in a Tanganyikan cichlid fish. Journal of Zoology. DOI: 10.1111/jzo.12222

Scavia, D., J.D. Allan, K.K. Arend, S. Bartell, D. Beletsky, N.S. Bosch, S.B. Brandt, R.D. Briland, I. Daloğlu, J.V. DePinto, D.M. Dolan, M.A. Evans, T.M. Farmer, D. Goto, H. Han, T.O. Höök, R. Knight, S.A. Ludsin, D. Mason, A.M. Michalak, R.P. Richards, J.J. Roberts, D.K. Rucinski, E. Rutherford, D.J. Schwab, T. Sesterhenn, H. Zhang and Y. Zhou. 2014. Assessing and addressing the re-eutrophication of Lake Erie: central basin hypoxia. Journal of Great Lakes Research 40: 226-246.

DeVries, D.R., R.A. Wright, D.C. Glover, T.M. Farmer, M.R. Lowe, A.J. Norris and A.C. Peer. 2014. Largemouth bass in coastal estuaries: A comprehensive study from the Mobile-Tensaw River Delta, Alabama. Southern Division of the American Fisheries Society Symposium, Black Bass Diversity: Multidisciplinary Science for Conservation.

Farmer, T.M., D.R. DeVries, R.A. Wright and J.E. Gagnon. 2013. Using seasonal variation in otolith microchemical composition to indicate largemouth bass and southern flounder residency patterns across an estuarine salinity gradient. Transactions of the American Fisheries Society 142: 1415-1429.

Lowe, M.L., S.A. Ludsin, B.J. Fryer, R.A. Wright, D.R. DeVries and T.M. Farmer. 2012. Response to “Comment on "Otolith Microchemistry Reveal Substantial Use of Freshwater by Southern Flounder in the Northern Gulf of Mexico” by Pedro Morais. Estuaries and Coasts 35: 107-110.

Farmer, T.M., R.A. Wright and D.R. DeVries. 2010. Mercury concentration in two estuarine fish populations across a seasonal salinity gradient. Transactions of the American Fisheries Society 139: 1896-1912.

 Links

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